Skip to content
Fowler Lab
Fowler Lab

Predicting antimicrobial resistance

  • News
  • Publications
  • Members
  • Research
    • Overview
    • Manifesto
    • Software
    • Reproducibility
  • Teaching
  • Contact
    • PhDs
  • Wiki
Fowler Lab
Fowler Lab

Predicting antimicrobial resistance

New refereed preprint: BashTheBug

Philip Fowler, 31st March 202231st March 2022

BashTheBug is a citizen science project hosted on the Zooniverse platform that we launched in April 2017 and asked volunteers to help us assess how well 20,637 clinical samples of M. tuberculosis grow on one of 13 different antibiotics.

To help engage with the volunteers it has its own blog, that has grown into the Modernising Medical Microbiology unit public engagement blog — see here.

Our first BashTheBug manuscript has just been made available as a refereed preprint — it it we show that the crowd of volunteers can reproducibly and accurately measure minimum inhibitory concentrations of antituberculars.

Share this:

  • Share on X (Opens in new window) X
  • Share on Bluesky (Opens in new window) Bluesky
  • Email a link to a friend (Opens in new window) Email
  • Share on LinkedIn (Opens in new window) LinkedIn
  • Share on Mastodon (Opens in new window) Mastodon

Related

antimicrobial resistance citizen science clinical microbiology tuberculosis

Post navigation

Previous post
Next post

Related Posts

antimicrobial resistance

New paper: automatically and reproducibly building a catalogue bedaquline resistance-associated variants

18th June 20251st July 2025

Dylan Adlard‘s paper describing how we can rapidly automatically build catalogues of bedaquiline resistance-associated variants…

Share this:

  • Share on X (Opens in new window) X
  • Share on Bluesky (Opens in new window) Bluesky
  • Email a link to a friend (Opens in new window) Email
  • Share on LinkedIn (Opens in new window) LinkedIn
  • Share on Mastodon (Opens in new window) Mastodon
Read More
antimicrobial resistance

New publication: how quickly can be calculate the effect of a mutation on an antibiotic?

20th November 202020th November 2020

The idea for this paper arose during talking over coffee at the BioExcel Alchemical Free…

Share this:

  • Share on X (Opens in new window) X
  • Share on Bluesky (Opens in new window) Bluesky
  • Email a link to a friend (Opens in new window) Email
  • Share on LinkedIn (Opens in new window) LinkedIn
  • Share on Mastodon (Opens in new window) Mastodon
Read More
antimicrobial resistance

New paper: Quantitative drug susceptibility testing for M. tuberculosis using unassembled sequencing data and machine learning

14th August 202414th August 2024

This is the last paper from the initial set of CRyPTIC publications following the project’s…

Share this:

  • Share on X (Opens in new window) X
  • Share on Bluesky (Opens in new window) Bluesky
  • Email a link to a friend (Opens in new window) Email
  • Share on LinkedIn (Opens in new window) LinkedIn
  • Share on Mastodon (Opens in new window) Mastodon
Read More

Leave a Reply Cancel reply

Your email address will not be published. Required fields are marked *

This site uses Akismet to reduce spam. Learn how your comment data is processed.

Privacy & Cookies: This site uses cookies. By continuing to use this website, you agree to their use.

To find out more, including how to control cookies, see here: Cookie Policy
    ©2026 Fowler Lab | WordPress Theme by SuperbThemes