New print: Epidemiological cutoff values for a 96-well broth microdilution plate for M. tuberculosis Philip Fowler, 5th March 202122nd March 2021 In this preprint, the CRyPTIC project proposes the maximum value of minimum inhibitory concentration (MIC) for 13 different anti-TB drugs below which a sample can be considered to be ‘genotypically wild-type’. It is necessary to establish these values, called epidemiological cutoff values (ECOFFs or ECVs), so that the MICs measured can be converted into binary (resistant/susceptible), or in the case of three drugs ternary (resistant/intermediate/susceptible), predictions. The preprint draws on 20,637 clinical isolates collected by 14 CRyPTIC laboratories based in 11 countries on five continents. Share this:Twitter Related antimicrobial resistance clinical microbiology publication research tuberculosis
antimicrobial resistance BashTheBug.net Beta Testing Results 5th April 20175th August 2018 Zooniverse have finished beta-testing my BashTheBug citizen science project. To verify that the task is… Share this:Twitter Read More
antimicrobial resistance BioExcel Alchemical Free Energy workshop 17th June 2019 Last month I was invited to give a talk on using alchemical free energy methods… Share this:Twitter Read More
antimicrobial resistance New publication: Automated detection of bacterial growth on 96-well plates for high-throughput drug susceptibility testing of M. tuberculosis 26th October 2018 In this Microbiology paper we show how a Python package, called the Automated Mycobacterial Detection Growth… Share this:Twitter Read More