New Publication: Proteins Alter the Stiffness of Membranes Philip Fowler, 23rd September 201629th September 2018 Although there have been many studies of proteins whose primary function is to ‘sculpt’ the surface of membranes e.g. BAR domains, there have been very few investigations of what effect regular membrane proteins have on the stiffness of membranes. Here we show via very large simulations, using the MARTINI coarse-grained forcefield, that ‘regular’ integral membrane proteins, such as an ion channel or a beta-barrel, reduce the stiffness of the membrane, leading to larger fluctuations. The systems studied push the boundaries of what is currently achievable with biomolecular simulation, containing around 50,000 lipids and 100 proteins. We had access to the French supercomputer CURIE, through the EU PRACE network, for this work. This is the second in a set of three papers that bring my research on cell signalling and membranes in the SBCB group within the Department of Biochemistry to a close and is available to download here. Share this: Share on X (Opens in new window) X Share on Bluesky (Opens in new window) Bluesky Email a link to a friend (Opens in new window) Email Share on LinkedIn (Opens in new window) LinkedIn Share on Mastodon (Opens in new window) Mastodon Related publication research
antimicrobial resistance New print: Epidemiological cutoff values for a 96-well broth microdilution plate for M. tuberculosis 5th March 202122nd March 2021 In this preprint, the CRyPTIC project proposes the maximum value of minimum inhibitory concentration (MIC)… Share this: Share on X (Opens in new window) X Share on Bluesky (Opens in new window) Bluesky Email a link to a friend (Opens in new window) Email Share on LinkedIn (Opens in new window) LinkedIn Share on Mastodon (Opens in new window) Mastodon Read More
molecular dynamics New Publication: Alchembed 12th June 2015 In much of my research I’ve looked at how proteins embedded in cell membranes behave. An… Share this: Share on X (Opens in new window) X Share on Bluesky (Opens in new window) Bluesky Email a link to a friend (Opens in new window) Email Share on LinkedIn (Opens in new window) LinkedIn Share on Mastodon (Opens in new window) Mastodon Read More
publication New Publication: Membrane Compartmentalization Reduces the Mobility of Lipids. 23rd September 201629th September 2018 Lipids are not free to diffuse around the cell membrane. Rather they are constrained not… Share this: Share on X (Opens in new window) X Share on Bluesky (Opens in new window) Bluesky Email a link to a friend (Opens in new window) Email Share on LinkedIn (Opens in new window) LinkedIn Share on Mastodon (Opens in new window) Mastodon Read More