antimicrobial resistance AMyGDA now available from GitHub Philip Fowler, 27th January 202027th January 2020 AMyGDA is a python module that analyses photographs of 96-well plates and, by examining each… Continue Reading
tuberculosis Numpy v Biopython Philip Fowler, 25th July 20194th August 2019 Having only recently having to write bioinformatics Python code that e.g. interrogate GenBank files to… Continue Reading
antimicrobial resistance Genetics and Tuberculosis: A Case of New Meets Old Philip Fowler, 12th July 2019 I was very pleased to be invited to contribute to this “Voices” article organised by… Continue Reading
antimicrobial resistance New preprint: Predicting pyrazinamide resistance by machine learning Philip Fowler, 29th April 201929th April 2019 Usually, the protein that an antibiotic binds is essential for bacterial survival, which is how… Continue Reading
antimicrobial resistance New publication: Automated detection of bacterial growth on 96-well plates for high-throughput drug susceptibility testing of M. tuberculosis Philip Fowler, 26th October 2018 In this Microbiology paper we show how a Python package, called the Automated Mycobacterial Detection Growth… Continue Reading
antimicrobial resistance BashTheBug reaches one million classifications Philip Fowler, 4th October 20184th October 2018 BashTheBug, a citizen science project I run that is helping us measure how different… Continue Reading