A catalogue recording whether individual mutations confer resistance or not to specified antibiotics is a…
Category: research
antimicrobial resistance
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New preprint: predicting rifampicin resistance
In this preprint we train a series of machine learning models on protein mutations found…
New preprint: comparing different genetics analysis pipelines for tuberculosis
Ruan Spies has done a careful systematic comparison of the current genetics pipelines that purport…
antimicrobial resistance
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Updating the Grammar for Antimicrobial Resistance Catalogues
This blog updates an old (and now out of date) post describing the grammar we’ve…
New preprint: validating antibiotic resistance prediction in our Myco pipeline
Over the last 18 months or so we’ve been designing, coding and testing a Mycobacterial…
antimicrobial resistance
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New paper: predicting pyrazinamide resistance
This paper has finally been published and you can find it here. It had a…