New preprint: a deep learning model that can read 96-well broth micro dilution plates Philip Fowler, 23rd February 202523rd February 2025 The CRyPTIC project used bespoke 96-well broth microdilution plates to measure the minimum inhibitory concentrations… Continue Reading
New preprint: automatically building a better bedaquiline catalogue Philip Fowler, 31st January 202531st January 2025 A catalogue recording whether individual mutations confer resistance or not to specified antibiotics is a… Continue Reading
SARS-CoV-2 pipeline live on EIT Pathogena Philip Fowler, 28th January 202528th January 2025 Back in the SARS-CoV-2 pandemic we worked closely with ORACLE Corp to build and deploy… Continue Reading
Updated preprint: A validated cloud-based genomic platform for co-ordinated, expedient global analysis of SARS-CoV-2 genomic epidemiology Philip Fowler, 23rd January 202528th January 2025 In August 2022 seven laboratories across the world uploaded their SARS-CoV-2 genetics files for processing… Continue Reading
group Dylan Adlard is an SSI Fellow! Philip Fowler, 15th January 202515th January 2025 Congratulations to Dylan Adlard for being appointed a Fellow with the Software Sustainability Institute for… Continue Reading
New preprint: comparing different genetics analysis pipelines for tuberculosis Philip Fowler, 13th January 202513th January 2025 Ruan Spies has done a careful systematic comparison of the current genetics pipelines that purport… Continue Reading