Fitness compensation in M. tuberculosis: A game of genetic chess vikibrunner, 11th March 202411th March 2024 It was a pleasure to write this short blog post for the Microbiology Society, talking about my latest paper on fitness compensation in M. tuberculosis, and the process that led to this work. 🖋 Apart from a very short summary of the paper I hence also describe parts of my PhD journey and what led @philipwfowler and I towards this particular project.📎 In case you are interested in our full story on fitness compensation in TB, here’s the link to the paper: https://doi.org/10.1099/mgen.0.001187 Share this: Share on X (Opens in new window) X Share on Bluesky (Opens in new window) Bluesky Email a link to a friend (Opens in new window) Email Share on LinkedIn (Opens in new window) LinkedIn Share on Mastodon (Opens in new window) Mastodon Related Uncategorised
Uncategorised New paper: predicting pyrazinamide using a graph convolutional network 3rd March 202612th March 2026 This paper is the start of us, as a group, using deep learning methods to… Share this: Share on X (Opens in new window) X Share on Bluesky (Opens in new window) Bluesky Email a link to a friend (Opens in new window) Email Share on LinkedIn (Opens in new window) LinkedIn Share on Mastodon (Opens in new window) Mastodon Read More
New preprint: comparing long- and short-read sequencing of Mycobacteria 7th February 202610th February 2026 In this preprint, we compare the differences when Mycobacterial samples are sequenced with either long-… Share this: Share on X (Opens in new window) X Share on Bluesky (Opens in new window) Bluesky Email a link to a friend (Opens in new window) Email Share on LinkedIn (Opens in new window) LinkedIn Share on Mastodon (Opens in new window) Mastodon Read More
New preprint: Rapid decontamination of SARS-CoV-2 genetic reads 24th January 202224th January 2022 This preprint describes some software, ReadItAndKeep, that rapidly removes host (i.e. human) genetic information from… Share this: Share on X (Opens in new window) X Share on Bluesky (Opens in new window) Bluesky Email a link to a friend (Opens in new window) Email Share on LinkedIn (Opens in new window) LinkedIn Share on Mastodon (Opens in new window) Mastodon Read More