antimicrobial resistance New preprint: rapidly and reproducibly building resistant catalogues for M. tuberculosis Philip Fowler, 3rd October 20253rd October 2025 The CRyPTIC project carried out many exciting research projects but it never quite got around… Continue Reading
antimicrobial resistance New paper: predicting rifampicin resistance via free energy simulation Philip Fowler, 23rd September 20253rd October 2025 This work was carried out by Xibei Zhang, who is doing her PhD with Peter… Continue Reading
antimicrobial resistance New paper: automatically and reproducibly building a catalogue bedaquline resistance-associated variants Philip Fowler, 18th June 20251st July 2025 Dylan Adlard‘s paper describing how we can rapidly automatically build catalogues of bedaquiline resistance-associated variants… Continue Reading
antimicrobial resistance New paper: a deep learning model that reads MICs from images of 96 well plates Philip Fowler, 26th May 20251st July 2025 Our paper describing how a convolutional neural network model can determine the minimum inhibitory concentrations… Continue Reading
antimicrobial resistance New preprint: predicting rifampicin resistance Philip Fowler, 16th August 202416th August 2024 In this preprint we train a series of machine learning models on protein mutations found… Continue Reading
antimicrobial resistance Updating the Grammar for Antimicrobial Resistance Catalogues Philip Fowler, 18th July 202418th July 2024 This blog updates an old (and now out of date) post describing the grammar we’ve… Continue Reading