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Predicting antibiotic resistance de novo

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Fowler Lab
Fowler Lab

Predicting antibiotic resistance de novo

Author: Philip Fowler

Philip W Fowler is a computational biophysicist studying antimicrobial resistance working at the John Radcliffe Hospital in Oxford.
computing

How to setup a Gramble

Philip Fowler, 14th April 2016

This is a Gramble, which of course is short for a GROMACS Bramble, or, in…

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antimicrobial resistance

I’ve moved…

Philip Fowler, 14th March 20165th August 2018

Today is my first day as a Senior Researcher in Modernising Medical Microbiology in the…

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computing

New Publication: Predicting affinities for peptide transporters

Philip Fowler, 29th January 201629th September 2018

PepT1 is a nutrient transporter found in the cells that line your small intestine. It…

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computing

GROMACS on AWS: compiling against CUDA

Philip Fowler, 27th January 201623rd September 2018

If you want to compile GROMACS to run on a GPU Amazon Web Services EC2…

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computing

GROMACS on AWS: compiling GCC

Philip Fowler, 27th January 201623rd September 2018

These are some quick instructions on how to build a more recent version of GCC…

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computing

GROMACS on AWS: Performance and Cost

Philip Fowler, 17th January 20163rd March 2019

So we have created an Amazon Machine Image (AMI) with GROMACS installed. In this post…

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