New publication: Predicting resistance is (not) futile Philip Fowler, 21st August 201921st August 2019 Our “First Reactions” article has been published in ACS Central Science. We discuss the paper, Predicting Kinase Inhibitor Resistance: Physics-Based and Data-Driven Approaches, by Matteo Aldeghi, Vytautas Gapsys and Bert de Groot, which is in the same issue of the journal. Aldeghi et al. apply a series of methods to try and predict the effect of individual mutations on how well tyrosine kinase inhibitors bind to the Abl kinase. These methods include not only alchemical free energy methods but also machine learning. You can read it here. Share this: Click to share on X (Opens in new window) X Click to share on Bluesky (Opens in new window) Bluesky Click to email a link to a friend (Opens in new window) Email Click to share on LinkedIn (Opens in new window) LinkedIn Click to share on Mastodon (Opens in new window) Mastodon Related antimicrobial resistance molecular dynamics publication
antimicrobial resistance New paper: a deep learning model that reads MICs from images of 96 well plates 26th May 20251st July 2025 Our paper describing how a convolutional neural network model can determine the minimum inhibitory concentrations… Share this: Click to share on X (Opens in new window) X Click to share on Bluesky (Opens in new window) Bluesky Click to email a link to a friend (Opens in new window) Email Click to share on LinkedIn (Opens in new window) LinkedIn Click to share on Mastodon (Opens in new window) Mastodon Read More
computing Running GROMACS on an AMD GPU using OpenCL 10th July 2015 I first used an Apple Mac when I was eight. Apart from a brief period… Share this: Click to share on X (Opens in new window) X Click to share on Bluesky (Opens in new window) Bluesky Click to email a link to a friend (Opens in new window) Email Click to share on LinkedIn (Opens in new window) LinkedIn Click to share on Mastodon (Opens in new window) Mastodon Read More
computing GROMACS2018 on NVIDIA DGX-1s 27th September 201929th October 2019 HECBioSim advertised for proposals to use JADE, the new Tier-2 UK GPU high performance computer… Share this: Click to share on X (Opens in new window) X Click to share on Bluesky (Opens in new window) Bluesky Click to email a link to a friend (Opens in new window) Email Click to share on LinkedIn (Opens in new window) LinkedIn Click to share on Mastodon (Opens in new window) Mastodon Read More