antimicrobial resistance New paper: Quantitative drug susceptibility testing for M. tuberculosis using unassembled sequencing data and machine learning Philip Fowler, 14th August 202414th August 2024 This is the last paper from the initial set of CRyPTIC publications following the project’s… Continue Reading
antimicrobial resistance Updating the Grammar for Antimicrobial Resistance Catalogues Philip Fowler, 18th July 202418th July 2024 This blog updates an old (and now out of date) post describing the grammar we’ve… Continue Reading
antimicrobial resistance FowlerLab at ESM 2024 Philip Fowler, 1st July 20241st July 2024 Three of us (Dylan Adlard, Dylan Dissanayake and Philip Fowler) attended the 44th Congress of… Continue Reading
clinical microbiology New preprint: processing 3.9 million SARS-CoV-2 samples to make a consistent phylogenetic tree Philip Fowler, 7th May 20247th May 2024 Martin Hunt, Zam Iqbal and lots of others have written an epic preprint where they… Continue Reading
antimicrobial resistance New paper: predicting pyrazinamide resistance Philip Fowler, 20th March 202420th March 2024 This paper has finally been published and you can find it here. It had a… Continue Reading
antimicrobial resistance New paper: detecting compensatory mutations in the RNAP of M. tuberculosis Philip Fowler, 5th February 20245th February 2024 In this paper, by examining testing the association between mutations known to be associate with… Continue Reading