AMyGDA now available from GitHub Philip Fowler, 27th January 202027th January 2020 0 shares AMyGDA is a python module that analyses photographs of 96-well plates and, by examining each well for bacterial growth, is able to read a series of minimum inhibitory concentrations for the antibiotics present on a plate. Previously it was only available to download from this website (due to licensing) if you gave your email address which was inconvenient and also meant the public version often lagged the current stable release. Now it is available directly from GitHub! Share this:Twitter Related antimicrobial resistance clinical microbiology computing tuberculosis
antimicrobial resistance New publication: how quickly can be calculate the effect of a mutation on an antibiotic? 20th November 202020th November 2020 The idea for this paper arose during talking over coffee at the BioExcel Alchemical Free… Share this:Twitter Read More
computing Software Carpentry Workshop, Jülich, 12-13 October 2015 23rd October 2015 Last week, myself and David Dotson from ASU, ran a 2 day Software Carpentry workshop… Share this:Twitter Read More
New publication: Predicting antibiotic resistance in complex protein targets using alchemical free energy methods 26th August 202224th October 2022 In this paper, Alice Brankin calculates how different mutations in the DNA gyrase affect the… Share this:Twitter Read More